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Database upgrade to Frodo missing latest updates

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Hi,

I was having some problems with upgrading to Frodo due to my database being on Amazon RDS, but managed to find a workaround... the problem now is that the upgrade is losing a lot of of my latest updates in the database and reverting it back to a version that is a couple of months (or more old).

The database looks fine on Eden and I've exported it all via Sequel Pro... when I import into a new MySQL server and open with Eden it's still fine, but when I open it in Frodo to upgrade it loses most of my updates.

Is there a reason for that?

Full log here: http://cl.ly/350b1g3v3O22

Thanks!

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